Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | EXZ48_10390 | Not Available | Negative | 2224008 - 2224595 | 21744.5 |
| uroporphyrinogen-iii c-methyltransferase | EXZ48_10395 | Not Available | Positive | 2224793 - 2226232 | 50682.0 |
| duf2849 domain-containing protein | EXZ48_10400 | Not Available | Positive | 2226234 - 2226551 | 11140.2 |
| nitrite/sulfite reductase | EXZ48_10405 | Not Available | Positive | 2226561 - 2228234 | 61787.6 |
| duf934 domain-containing protein | EXZ48_10410 | Not Available | Positive | 2228246 - 2228746 | 18077.5 |
| ferredoxin--nadp reductase | EXZ48_10415 | Not Available | Positive | 2228958 - 2229773 | 30428.5 |
| gntr family transcriptional regulator | EXZ48_10420 | Not Available | Negative | 2229827 - 2230447 | 22330.0 |
| protease | EXZ48_10425 | Not Available | Negative | 2230610 - 2231965 | 48113.3 |
| hypothetical protein | EXZ48_10430 | Not Available | Positive | 2232152 - 2232373 | 7783.31 |
| hypothetical protein | EXZ48_10435 | Not Available | Positive | 2232614 - 2233873 | 46579.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
