Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | EXZ48_10340 | Not Available | Positive | 2211486 - 2212499 | 36083.4 |
| nitrogen regulation protein nr(ii) | EXZ48_10345 | Not Available | Positive | 2212496 - 2213644 | 41623.9 |
| nitrogen regulation protein nr(i) | EXZ48_10350 | Not Available | Positive | 2213644 - 2215098 | 53667.6 |
| pas domain-containing sensor histidine kinase | EXZ48_10355 | Not Available | Positive | 2215306 - 2217576 | 82581.1 |
| sigma-54-dependent fis family transcriptional regulator | EXZ48_10360 | Not Available | Positive | 2217566 - 2218930 | 50518.1 |
| trk system potassium transporter trka | EXZ48_10365 | Not Available | Positive | 2218961 - 2220337 | 50079.7 |
| d-amino-acid transaminase | EXZ48_10370 | Not Available | Positive | 2220375 - 2221238 | 31279.1 |
| rna chaperone hfq | EXZ48_10375 | Not Available | Positive | 2221335 - 2221577 | 9043.02 |
| gtpase hflx | EXZ48_10380 | Not Available | Positive | 2221655 - 2222977 | 48705.9 |
| nucleoside triphosphate pyrophosphohydrolase | EXZ48_10385 | Not Available | Negative | 2223166 - 2223999 | 31710.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
