Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | EXZ48_10290 | Not Available | Positive | 2203458 - 2204099 | 22638.2 |
| duf465 domain-containing protein | EXZ48_10295 | Not Available | Positive | 2204166 - 2204426 | 10271.4 |
| dihydrolipoyl dehydrogenase | EXZ48_10300 | Not Available | Positive | 2204515 - 2205960 | 51512.0 |
| lipoyl synthase | EXZ48_10305 | Not Available | Positive | 2206051 - 2207028 | 36419.9 |
| aaa family atpase | EXZ48_10310 | Not Available | Positive | 2207100 - 2207663 | 21387.0 |
| aaa family atpase | EXZ48_10315 | Not Available | Positive | 2207674 - 2208237 | 21381.3 |
| type ii toxin-antitoxin system rata family toxin | EXZ48_10320 | Not Available | Positive | 2208247 - 2208696 | 17448.0 |
| hypothetical protein | EXZ48_10325 | Not Available | Positive | 2208755 - 2209618 | 31382.6 |
| cina family protein | EXZ48_10330 | Not Available | Negative | 2209620 - 2210117 | 17049.4 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EXZ48_10335 | Not Available | Negative | 2210120 - 2211331 | 42523.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
