Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycjx family protein | EXZ48_10240 | Not Available | Negative | 2189738 - 2191213 | 54010.7 |
| histidine phosphatase family protein | EXZ48_10245 | Not Available | Negative | 2191371 - 2191937 | 20687.0 |
| eal domain-containing protein | EXZ48_10250 | Not Available | Negative | 2191969 - 2193939 | 72143.1 |
| rna polymerase-binding protein dksa | EXZ48_10255 | Not Available | Positive | 2194302 - 2194721 | 16162.8 |
| hypothetical protein | EXZ48_10260 | Not Available | Negative | 2194895 - 2195947 | 37347.8 |
| response regulator | EXZ48_10265 | Not Available | Positive | 2196195 - 2198813 | 94701.2 |
| septum formation initiator family protein | EXZ48_10270 | Not Available | Positive | 2199167 - 2199475 | 12088.7 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | EXZ48_10275 | Not Available | Positive | 2199625 - 2200671 | 38237.3 |
| pyruvate dehydrogenase complex e1 component subunit beta | EXZ48_10280 | Not Available | Positive | 2200689 - 2202074 | 48913.2 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | EXZ48_10285 | Not Available | Positive | 2202090 - 2203442 | 46295.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
