Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1003 domain-containing protein | EXZ48_10090 | Not Available | Negative | 2151404 - 2151934 | 20087.2 |
| lta synthase family protein | EXZ48_10095 | Not Available | Negative | 2151990 - 2153918 | 72143.4 |
| nad+ synthase | EXZ48_10100 | Not Available | Positive | 2154233 - 2155912 | 61155.9 |
| ammonium transporter | EXZ48_10105 | Not Available | Positive | 2155916 - 2156272 | 12792.4 |
| diguanylate cyclase | EXZ48_10110 | Not Available | Positive | 2156371 - 2157882 | 55105.7 |
| sdr family oxidoreductase | EXZ48_10115 | Not Available | Positive | 2158119 - 2158937 | 28489.1 |
| 5,6-dimethylbenzimidazole synthase | EXZ48_10120 | Not Available | Positive | 2159261 - 2159953 | 25604.8 |
| duf2865 domain-containing protein | EXZ48_10125 | Not Available | Negative | 2159946 - 2161055 | 39526.2 |
| phytanoyl-coa dioxygenase | EXZ48_10130 | Not Available | Positive | 2161160 - 2162386 | 45802.0 |
| abc-f family atp-binding cassette domain-containing protein | EXZ48_10135 | Not Available | Positive | 2162539 - 2164128 | 55650.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
