Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2059 domain-containing protein | EXZ48_10040 | Not Available | Positive | 2142209 - 2142751 | 18830.4 |
| hypothetical protein | EXZ48_10045 | Not Available | Positive | 2142854 - 2143717 | 32313.0 |
| hypothetical protein | EXZ48_10050 | Not Available | Negative | 2143760 - 2144095 | 12286.4 |
| glutathione-disulfide reductase | EXZ48_10055 | Not Available | Positive | 2144368 - 2145756 | 49668.8 |
| lysr family transcriptional regulator | EXZ48_10060 | Not Available | Negative | 2145734 - 2146636 | 32778.2 |
| hypothetical protein | EXZ48_10065 | Not Available | Positive | 2146784 - 2147014 | 8548.47 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | EXZ48_10070 | Not Available | Positive | 2147197 - 2148570 | 50713.3 |
| gfa family protein | EXZ48_10075 | Not Available | Positive | 2148694 - 2149089 | 14305.8 |
| hypothetical protein | EXZ48_10080 | Not Available | Negative | 2149114 - 2150835 | 59048.4 |
| pilus assembly protein | EXZ48_10085 | Not Available | Negative | 2150838 - 2151260 | 15695.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
