Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_09940 | Not Available | Negative | 2121683 - 2122108 | 16013.2 |
| hypothetical protein | EXZ48_09945 | Not Available | Positive | 2123310 - 2123921 | 22767.3 |
| duf1176 domain-containing protein | EXZ48_09950 | Not Available | Negative | 2124441 - 2125091 | 23299.3 |
| gtp 3',8-cyclase moaa | EXZ48_09955 | Not Available | Negative | 2125115 - 2126101 | 36890.6 |
| duf971 domain-containing protein | EXZ48_09960 | Not Available | Positive | 2126302 - 2126676 | 13824.4 |
| potassium transporter | EXZ48_09965 | Not Available | Positive | 2126734 - 2128560 | 64437.5 |
| duf1211 domain-containing protein | EXZ48_09970 | Not Available | Positive | 2128634 - 2129200 | 20813.1 |
| hypothetical protein | EXZ48_09975 | Not Available | Positive | 2129218 - 2130429 | 43682.9 |
| marr family transcriptional regulator | EXZ48_09980 | Not Available | Negative | 2130426 - 2130896 | 17830.9 |
| alpha/beta fold hydrolase | EXZ48_09985 | Not Available | Positive | 2130945 - 2131853 | 32187.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
