Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | EXZ48_09890 | Not Available | Positive | 2111392 - 2112423 | 38191.4 |
| gtp-binding protein | EXZ48_09895 | Not Available | Negative | 2112470 - 2113675 | 44472.7 |
| zinc abc transporter substrate-binding protein znua | EXZ48_09900 | Not Available | Negative | 2113918 - 2114934 | 35801.1 |
| metal abc transporter atp-binding protein | EXZ48_09905 | Not Available | Positive | 2115034 - 2115963 | 33105.9 |
| zinc abc transporter permease subunit znub | EXZ48_09910 | Not Available | Positive | 2115956 - 2116786 | 29123.8 |
| transcriptional repressor | EXZ48_09915 | Not Available | Positive | 2116783 - 2117178 | 14479.3 |
| hypothetical protein | EXZ48_09920 | Not Available | Negative | 2117247 - 2119157 | 68166.1 |
| gamma carbonic anhydrase family protein | EXZ48_09925 | Not Available | Negative | 2119256 - 2119783 | 18348.1 |
| trna dihydrouridine(20/20a) synthase dusa | EXZ48_09930 | Not Available | Positive | 2119891 - 2120958 | 38017.8 |
| molecular chaperone dnaj | EXZ48_09935 | Not Available | Positive | 2121080 - 2121667 | 21946.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
