Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome oxidase assembly protein ccos | EXZ48_09840 | Not Available | Positive | 2100213 - 2100368 | 5594.77 |
| nadp-dependent phosphogluconate dehydrogenase | EXZ48_09845 | Not Available | Positive | 2100581 - 2102011 | 50797.1 |
| mfs transporter | EXZ48_09850 | Not Available | Negative | 2102086 - 2103339 | 43240.1 |
| laci family dna-binding transcriptional regulator | EXZ48_09855 | Not Available | Negative | 2103467 - 2104510 | 38216.2 |
| carbohydrate abc transporter substrate-binding protein | EXZ48_09860 | Not Available | Positive | 2104935 - 2106170 | 43394.6 |
| sugar abc transporter permease | EXZ48_09865 | Not Available | Positive | 2106299 - 2107201 | 33513.9 |
| carbohydrate abc transporter permease | EXZ48_09870 | Not Available | Positive | 2107194 - 2108123 | 33894.4 |
| abc transporter atp-binding protein | EXZ48_09875 | Not Available | Positive | 2108127 - 2109209 | 39265.7 |
| sugar phosphate isomerase/epimerase | EXZ48_09880 | Not Available | Positive | 2109273 - 2110034 | 27840.0 |
| gfo/idh/moca family oxidoreductase | EXZ48_09885 | Not Available | Positive | 2110047 - 2111180 | 40846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
