Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit ii | EXZ48_09790 | Not Available | Positive | 2091455 - 2092186 | 27202.3 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | EXZ48_09795 | Not Available | Positive | 2092198 - 2092350 | 5615.87 |
| cytochrome-c oxidase, cbb3-type subunit iii | EXZ48_09800 | Not Available | Positive | 2092353 - 2093216 | 30680.1 |
| ggdef domain-containing protein | EXZ48_09805 | Not Available | Negative | 2093296 - 2094033 | 25939.5 |
| voc family protein | EXZ48_09810 | Not Available | Negative | 2094152 - 2094508 | 12905.1 |
| srpbcc family protein | EXZ48_09815 | Not Available | Negative | 2094505 - 2094921 | 15228.0 |
| arac family transcriptional regulator | EXZ48_09820 | Not Available | Negative | 2094986 - 2095864 | 31425.5 |
| cytochrome c oxidase accessory protein ccog | EXZ48_09825 | Not Available | Positive | 2095863 - 2097434 | 58524.0 |
| cation transporter | EXZ48_09830 | Not Available | Positive | 2097434 - 2097931 | 17802.3 |
| cadmium-translocating p-type atpase | EXZ48_09835 | Not Available | Positive | 2097928 - 2100216 | 80657.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
