Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EXZ48_09690 | Not Available | Positive | 2072216 - 2072857 | 24117.1 |
| hypothetical protein | EXZ48_09695 | Not Available | Negative | 2073000 - 2073785 | 27266.4 |
| class c beta-lactamase-related serine hydrolase | EXZ48_09700 | Not Available | Positive | 2073919 - 2075013 | 39419.2 |
| cobalamin biosynthesis protein | EXZ48_09705 | Not Available | Positive | 2075213 - 2075689 | 16249.3 |
| uroporphyrinogen-iii c-methyltransferase | EXZ48_09710 | Not Available | Positive | 2075689 - 2076531 | 29214.5 |
| cobyrinate a,c-diamide synthase | EXZ48_09715 | Not Available | Positive | 2076528 - 2077835 | 45550.0 |
| threonine-phosphate decarboxylase | EXZ48_09720 | Not Available | Positive | 2077832 - 2078845 | 35042.1 |
| cobalamin biosynthesis protein | EXZ48_09725 | Not Available | Positive | 2078842 - 2079822 | 34364.4 |
| l,d-transpeptidase | EXZ48_09730 | Not Available | Positive | 2079975 - 2080403 | 15891.2 |
| crp/fnr family transcriptional regulator | EXZ48_09735 | Not Available | Negative | 2080413 - 2081138 | 27301.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
