Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXZ48_09640 | Not Available | Negative | 2059350 - 2060348 | 35749.2 |
| hypothetical protein | EXZ48_09645 | Not Available | Negative | 2060690 - 2060968 | 10270.0 |
| hypothetical protein | EXZ48_09650 | Not Available | Negative | 2061110 - 2061253 | 5260.44 |
| cobyric acid synthase | EXZ48_09655 | Not Available | Positive | 2061500 - 2062963 | 51448.9 |
| peptidoglycan-binding protein | EXZ48_09660 | Not Available | Positive | 2063114 - 2065069 | 69936.3 |
| cobalt transporter | EXZ48_09665 | Not Available | Positive | 2065564 - 2065740 | 5989.12 |
| cobalt transporter | EXZ48_09670 | Not Available | Positive | 2065753 - 2066547 | 26952.8 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | EXZ48_09675 | Not Available | Positive | 2066549 - 2067073 | 18969.0 |
| cobalamin biosynthesis protein cobw | EXZ48_09680 | Not Available | Positive | 2067077 - 2068126 | 37666.8 |
| cobaltochelatase subunit cobn | EXZ48_09685 | Not Available | Positive | 2068374 - 2072189 | 137240.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
