Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | EXZ48_09540 | Not Available | Negative | 2041793 - 2042380 | 21556.1 |
| hypothetical protein | EXZ48_09545 | Not Available | Negative | 2042373 - 2042675 | 11157.2 |
| formyl transferase | EXZ48_09550 | Not Available | Negative | 2042884 - 2043696 | 30107.8 |
| duf1638 domain-containing protein | EXZ48_09555 | Not Available | Negative | 2043763 - 2044404 | 23597.0 |
| entericidin a/b family lipoprotein | EXZ48_09560 | Not Available | Positive | 2044419 - 2044577 | 5409.57 |
| cobalamin-binding protein | EXZ48_09565 | Not Available | Negative | 2044626 - 2045321 | 25192.7 |
| trimethylamine methyltransferase | EXZ48_09570 | Not Available | Positive | 2045692 - 2047275 | 57363.1 |
| 4fe-4s dicluster domain-containing protein | EXZ48_09575 | Not Available | Positive | 2047410 - 2048066 | 23198.9 |
| hypothetical protein | EXZ48_09580 | Not Available | Positive | 2048115 - 2048858 | 26847.4 |
| rna polymerase sigma factor | EXZ48_09585 | Not Available | Positive | 2048938 - 2049459 | 19436.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
