Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EXZ48_09490 | Not Available | Positive | 2033984 - 2034592 | 22367.0 |
| hypothetical protein | EXZ48_09495 | Not Available | Negative | 2034698 - 2034901 | 7995.45 |
| hypothetical protein | EXZ48_09500 | Not Available | Negative | 2035007 - 2035225 | 8146.45 |
| lysr family transcriptional regulator | EXZ48_09505 | Not Available | Positive | 2035342 - 2036259 | 33769.3 |
| hypothetical protein | EXZ48_09510 | Not Available | Negative | 2036297 - 2036602 | 10824.4 |
| hypothetical protein | EXZ48_09515 | Not Available | Negative | 2036710 - 2037018 | 11172.8 |
| duf4445 domain-containing protein | EXZ48_09520 | Not Available | Negative | 2037205 - 2039277 | 74918.5 |
| hypothetical protein | EXZ48_09525 | Not Available | Negative | 2039314 - 2039637 | 11474.2 |
| methyltetrahydrofolate cobalamin methyltransferase | EXZ48_09530 | Not Available | Negative | 2039639 - 2040604 | 33732.9 |
| methylenetetrahydrofolate reductase | EXZ48_09535 | Not Available | Negative | 2040695 - 2041789 | 40156.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
