Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | EXZ48_09440 | Not Available | Negative | 2021168 - 2023342 | 78773.6 |
| hydrogen peroxide-inducible genes activator | EXZ48_09445 | Not Available | Positive | 2023511 - 2024410 | 32511.7 |
| duf3307 domain-containing protein | EXZ48_09450 | Not Available | Negative | 2024438 - 2024743 | 11042.0 |
| hypothetical protein | EXZ48_09455 | Not Available | Negative | 2025059 - 2026456 | 49384.9 |
| duf924 domain-containing protein | EXZ48_09460 | Not Available | Positive | 2026609 - 2027166 | 21333.0 |
| mechanosensitive ion channel family protein | EXZ48_09465 | Not Available | Positive | 2027190 - 2029748 | 91760.4 |
| hypothetical protein | EXZ48_09470 | Not Available | Positive | 2029896 - 2030159 | 8911.94 |
| response regulator | EXZ48_09475 | Not Available | Positive | 2030346 - 2031173 | 30821.1 |
| diguanylate cyclase | EXZ48_09480 | Not Available | Positive | 2031395 - 2032639 | 45785.0 |
| glxa family transcriptional regulator | EXZ48_09485 | Not Available | Negative | 2032678 - 2033685 | 37510.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
