Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | EXZ48_09390 | Not Available | Negative | 2011156 - 2012631 | 52810.1 |
| terc family protein | EXZ48_09395 | Not Available | Positive | 2013008 - 2013619 | 21299.9 |
| hypothetical protein | EXZ48_09400 | Not Available | Positive | 2013730 - 2014554 | 29550.0 |
| 4-oxalocrotonate tautomerase | EXZ48_09405 | Not Available | Positive | 2014598 - 2014831 | 8620.4 |
| hypothetical protein | EXZ48_09410 | Not Available | Positive | 2014945 - 2015679 | 26090.1 |
| dmt family transporter | EXZ48_09415 | Not Available | Negative | 2015787 - 2016677 | 30264.5 |
| extracellular solute-binding protein | EXZ48_09420 | Not Available | Positive | 2017083 - 2018060 | 33920.5 |
| iron abc transporter permease | EXZ48_09425 | Not Available | Positive | 2018078 - 2019772 | 59310.6 |
| abc transporter atp-binding protein | EXZ48_09430 | Not Available | Positive | 2019760 - 2020791 | 37191.0 |
| hypothetical protein | EXZ48_09435 | Not Available | Positive | 2020887 - 2021066 | 6246.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
