Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | EXZ48_09190 | Not Available | Positive | 1966261 - 1967088 | 29942.9 |
| choline dehydrogenase | EXZ48_09195 | Not Available | Positive | 1967092 - 1968732 | 60023.1 |
| nipsnap family protein | EXZ48_09200 | Not Available | Positive | 1968729 - 1969049 | 12315.8 |
| bmp family abc transporter substrate-binding protein | EXZ48_09205 | Not Available | Positive | 1969166 - 1970191 | 35875.5 |
| atp-binding cassette domain-containing protein | EXZ48_09210 | Not Available | Positive | 1970339 - 1971919 | 55631.3 |
| abc transporter permease | EXZ48_09215 | Not Available | Positive | 1971916 - 1972953 | 35635.6 |
| abc transporter permease | EXZ48_09220 | Not Available | Positive | 1972950 - 1973843 | 30499.4 |
| voc family protein | EXZ48_09225 | Not Available | Positive | 1973852 - 1974277 | 15349.4 |
| nucleoside hydrolase | EXZ48_09230 | Not Available | Positive | 1974274 - 1975212 | 33888.4 |
| amidohydrolase | EXZ48_09235 | Not Available | Positive | 1975209 - 1976717 | 54208.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
