Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | EXZ48_09140 | Not Available | Positive | 1957288 - 1958244 | 34634.7 |
| m20/m25/m40 family metallo-hydrolase | EXZ48_09145 | Not Available | Positive | 1958249 - 1959523 | 45189.9 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EXZ48_09150 | Not Available | Positive | 1959564 - 1960871 | 46504.1 |
| nuclear transport factor 2 family protein | EXZ48_09155 | Not Available | Positive | 1960890 - 1961264 | 13837.3 |
| dmt family transporter | EXZ48_09160 | Not Available | Positive | 1961225 - 1962247 | 34832.0 |
| pyridoxal phosphate-dependent aminotransferase | EXZ48_09165 | Not Available | Positive | 1962380 - 1963324 | 33484.3 |
| pyridoxal phosphate-dependent aminotransferase | EXZ48_09170 | Not Available | Positive | 1963086 - 1963634 | 19905.1 |
| mfs transporter | EXZ48_09175 | Not Available | Negative | 1963711 - 1964841 | 38577.6 |
| arsr family transcriptional regulator | EXZ48_09180 | Not Available | Positive | 1964984 - 1965310 | 11949.6 |
| tetr family transcriptional regulator | EXZ48_09185 | Not Available | Negative | 1965369 - 1966001 | 24026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
