Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phzf family phenazine biosynthesis protein | EXZ48_09040 | Not Available | Positive | 1938010 - 1938927 | 32563.9 |
| Trna-lys | Not Available | Not Available | Positive | 1939045 - 1939120 | Not Available |
| nudix domain-containing protein | EXZ48_09050 | Not Available | Negative | 1939272 - 1939751 | 17680.5 |
| bestrophin | EXZ48_09055 | Not Available | Negative | 1939922 - 1940818 | 32549.0 |
| gamma-glutamylcyclotransferase | EXZ48_09060 | Not Available | Positive | 1940989 - 1941336 | 12894.3 |
| molybdopterin molybdenumtransferase moea | EXZ48_09065 | Not Available | Positive | 1941352 - 1942584 | 42943.2 |
| iron abc transporter substrate-binding protein | EXZ48_09070 | Not Available | Positive | 1942659 - 1943687 | 36113.8 |
| iron abc transporter permease | EXZ48_09075 | Not Available | Positive | 1943688 - 1944704 | 35206.9 |
| transporter | EXZ48_09080 | Not Available | Negative | 1944756 - 1944965 | 7139.62 |
| hypothetical protein | EXZ48_09085 | Not Available | Positive | 1945167 - 1946225 | 39001.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
