Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4087 domain-containing protein | EXZ48_08990 | Not Available | Negative | 1927637 - 1927999 | 12962.3 |
| hypothetical protein | EXZ48_08995 | Not Available | Negative | 1928010 - 1928309 | 10772.5 |
| hypothetical protein | EXZ48_09000 | Not Available | Negative | 1928428 - 1928808 | 13840.5 |
| tetr/acrr family transcriptional regulator | EXZ48_09005 | Not Available | Positive | 1929212 - 1929859 | 22738.6 |
| ketol-acid reductoisomerase | EXZ48_09010 | Not Available | Positive | 1929919 - 1930938 | 36569.1 |
| plp-dependent aminotransferase family protein | EXZ48_09015 | Not Available | Positive | 1931406 - 1932629 | 43865.6 |
| m20/m25/m40 family metallo-hydrolase | EXZ48_09020 | Not Available | Negative | 1932793 - 1934376 | 57138.5 |
| lrp/asnc family transcriptional regulator | EXZ48_09025 | Not Available | Positive | 1934575 - 1934991 | 15146.5 |
| hypothetical protein | EXZ48_09030 | Not Available | Negative | 1935004 - 1936620 | 58188.4 |
| endonuclease | EXZ48_09035 | Not Available | Positive | 1936775 - 1937881 | 42547.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
