Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb family transcriptional regulator | EXZ48_08940 | Not Available | Negative | 1917776 - 1918822 | 36266.8 |
| atp-binding protein | EXZ48_08945 | Not Available | Positive | 1919012 - 1920139 | 42006.8 |
| merr family transcriptional regulator | EXZ48_08950 | Not Available | Negative | 1920219 - 1920899 | 25168.2 |
| hypothetical protein | EXZ48_08955 | Not Available | Negative | 1921225 - 1922322 | 39692.5 |
| pyridoxine 5'-phosphate synthase | EXZ48_08960 | Not Available | Positive | 1922571 - 1923323 | 27259.4 |
| nad-dependent epimerase/dehydratase family protein | EXZ48_08965 | Not Available | Negative | 1923367 - 1924254 | 30265.0 |
| transcriptional regulator | EXZ48_08970 | Not Available | Positive | 1924423 - 1924830 | 15223.3 |
| fad-dependent monooxygenase | EXZ48_08975 | Not Available | Positive | 1924874 - 1926118 | 44146.9 |
| marr family transcriptional regulator | EXZ48_08980 | Not Available | Negative | 1926060 - 1927073 | 36839.6 |
| cold-shock protein | EXZ48_08985 | Not Available | Negative | 1927225 - 1927434 | 7473.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
