Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | EXZ48_08840 | Not Available | Negative | 1899347 - 1900678 | 49443.2 |
| duf2853 family protein | EXZ48_08845 | Not Available | Positive | 1900917 - 1901228 | 11290.5 |
| thymidylate synthase | EXZ48_08850 | Not Available | Positive | 1901316 - 1902110 | 30064.9 |
| dihydrofolate reductase | EXZ48_08855 | Not Available | Positive | 1902126 - 1902647 | 18734.6 |
| ftsh protease activity modulator hflk | EXZ48_08860 | Not Available | Positive | 1902802 - 1903929 | 40742.0 |
| protease modulator hflc | EXZ48_08865 | Not Available | Positive | 1903929 - 1904855 | 34744.9 |
| duf2065 domain-containing protein | EXZ48_08870 | Not Available | Positive | 1904863 - 1905051 | 6709.56 |
| degq family serine endoprotease | EXZ48_08875 | Not Available | Positive | 1905178 - 1906686 | 52675.7 |
| n-acetyltransferase | EXZ48_08880 | Not Available | Negative | 1906778 - 1907332 | 21035.1 |
| phosphoserine phosphatase serb | EXZ48_08885 | Not Available | Negative | 1907332 - 1908222 | 31010.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
