Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | EXZ48_08790 | Not Available | Negative | 1886066 - 1886479 | 15102.1 |
| cyclase family protein | EXZ48_08795 | Not Available | Negative | 1886528 - 1887349 | 29296.5 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_08800 | Not Available | Positive | 1887649 - 1888824 | 41749.6 |
| efflux rnd transporter permease subunit | EXZ48_08805 | Not Available | Positive | 1888824 - 1892000 | 112367.0 |
| fad-binding protein | EXZ48_08810 | Not Available | Positive | 1892265 - 1893686 | 50235.9 |
| asma family protein | EXZ48_08815 | Not Available | Positive | 1893729 - 1897526 | 133089.0 |
| aryl-sulfate sulfotransferase | EXZ48_08820 | Not Available | Negative | 1897643 - 1897867 | 8277.98 |
| duf4169 family protein | EXZ48_08825 | Not Available | Negative | 1898004 - 1898213 | 7900.29 |
| hypothetical protein | EXZ48_08830 | Not Available | Negative | 1898223 - 1898744 | 19390.7 |
| Tmrna,resume consensus sequence (at 207): tgtagttgcaaacgacaa | Not Available | Not Available | Positive | 1898948 - 1899290 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
