Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_08740 | Not Available | Negative | 1874190 - 1874420 | 8707.61 |
| duf1194 domain-containing protein | EXZ48_08745 | Not Available | Negative | 1874520 - 1875308 | 27907.3 |
| hypothetical protein | EXZ48_08750 | Not Available | Positive | 1875489 - 1876577 | 41791.3 |
| tetr/acrr family transcriptional regulator | EXZ48_08755 | Not Available | Negative | 1876579 - 1877187 | 22120.7 |
| nmra family transcriptional regulator | EXZ48_08760 | Not Available | Positive | 1877294 - 1878118 | 29567.9 |
| duf1772 domain-containing protein | EXZ48_08765 | Not Available | Positive | 1878121 - 1878612 | 16759.7 |
| amidase | EXZ48_08770 | Not Available | Positive | 1878662 - 1880095 | 51320.3 |
| duf2778 domain-containing protein | EXZ48_08775 | Not Available | Positive | 1880349 - 1881539 | 43265.4 |
| pas domain s-box protein | EXZ48_08780 | Not Available | Positive | 1881795 - 1883471 | 61604.9 |
| atp-dependent dna helicase | EXZ48_08785 | Not Available | Negative | 1883504 - 1885963 | 91941.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
