Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EXZ48_08690 | Not Available | Negative | 1862132 - 1863688 | 54361.5 |
| nad(p)/fad-dependent oxidoreductase | EXZ48_08695 | Not Available | Negative | 1863675 - 1865294 | 59782.1 |
| methyltransferase domain-containing protein | EXZ48_08700 | Not Available | Positive | 1865458 - 1866276 | 28856.3 |
| tetr family transcriptional regulator | EXZ48_08705 | Not Available | Positive | 1866318 - 1866983 | 24108.7 |
| extracellular solute-binding protein | EXZ48_08710 | Not Available | Positive | 1867012 - 1868094 | 39355.1 |
| abc transporter atp-binding protein | EXZ48_08715 | Not Available | Negative | 1868181 - 1869275 | 39910.3 |
| abc transporter permease | EXZ48_08720 | Not Available | Negative | 1869306 - 1870130 | 29867.6 |
| abc transporter permease | EXZ48_08725 | Not Available | Negative | 1870127 - 1871044 | 33760.1 |
| aminotransferase | EXZ48_08730 | Not Available | Positive | 1871306 - 1872730 | 51428.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EXZ48_08735 | Not Available | Negative | 1872826 - 1874025 | 45487.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
