Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein | EXZ48_08640 | Not Available | Positive | 1849997 - 1851256 | 45485.6 |
| sugar abc transporter permease | EXZ48_08645 | Not Available | Positive | 1851545 - 1852495 | 35238.1 |
| carbohydrate abc transporter permease | EXZ48_08650 | Not Available | Positive | 1852511 - 1853350 | 30504.4 |
| gfo/idh/moca family oxidoreductase | EXZ48_08655 | Not Available | Positive | 1853347 - 1854411 | 38660.2 |
| abc transporter atp-binding protein | EXZ48_08660 | Not Available | Positive | 1854423 - 1855424 | 36185.8 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_08665 | Not Available | Positive | 1855602 - 1856888 | 44976.9 |
| multidrug efflux rnd transporter permease subunit | EXZ48_08670 | Not Available | Positive | 1856900 - 1860037 | 111425.0 |
| tetr family transcriptional regulator | EXZ48_08675 | Not Available | Positive | 1860044 - 1860667 | 23371.0 |
| hypothetical protein | EXZ48_08680 | Not Available | Negative | 1860659 - 1860901 | 9303.11 |
| aminomethyl transferase family protein | EXZ48_08685 | Not Available | Negative | 1860903 - 1862126 | 46053.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
