Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | EXZ48_08590 | Not Available | Negative | 1840829 - 1841428 | 21865.5 |
| purine-binding chemotaxis protein chew | EXZ48_08595 | Not Available | Positive | 1841975 - 1842439 | 16766.8 |
| crea protein | EXZ48_08600 | Not Available | Negative | 1842505 - 1843011 | 18258.8 |
| copper homeostasis protein cutc | EXZ48_08605 | Not Available | Negative | 1843104 - 1843850 | 26029.4 |
| membrane dipeptidase | EXZ48_08610 | Not Available | Negative | 1843873 - 1844928 | 37875.1 |
| n-acetylglucosamine-6-phosphate deacetylase | EXZ48_08615 | Not Available | Negative | 1845013 - 1846173 | 40361.6 |
| sis domain-containing protein | EXZ48_08620 | Not Available | Negative | 1846170 - 1847192 | 34940.7 |
| gntr family transcriptional regulator | EXZ48_08625 | Not Available | Negative | 1847213 - 1847977 | 27751.6 |
| n-acetylglucosamine kinase | EXZ48_08630 | Not Available | Negative | 1847974 - 1848861 | 30192.9 |
| n-acetylmuramic acid 6-phosphate etherase | EXZ48_08635 | Not Available | Positive | 1849060 - 1849953 | 30132.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
