Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02588 family protein | EXZ48_08540 | Not Available | Negative | 1830440 - 1830850 | 14708.4 |
| tigr02587 family membrane protein | EXZ48_08545 | Not Available | Negative | 1830858 - 1831700 | 29882.1 |
| dead/deah box helicase | EXZ48_08550 | Not Available | Negative | 1831775 - 1833718 | 71507.5 |
| pantoate--beta-alanine ligase | EXZ48_08555 | Not Available | Positive | 1834000 - 1834869 | 31522.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EXZ48_08560 | Not Available | Positive | 1834871 - 1835695 | 29260.5 |
| branched-chain amino acid abc transporter permease | EXZ48_08565 | Not Available | Positive | 1835878 - 1836612 | 25896.7 |
| azld family protein | EXZ48_08570 | Not Available | Positive | 1836615 - 1836926 | 10879.9 |
| aminopeptidase p family protein | EXZ48_08575 | Not Available | Negative | 1836916 - 1838751 | 65790.7 |
| hypothetical protein | EXZ48_08580 | Not Available | Negative | 1838915 - 1839439 | 19777.6 |
| 50s ribosomal protein l11 methyltransferase | EXZ48_08585 | Not Available | Negative | 1839869 - 1840750 | 32061.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
