Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EXZ48_08440 | Not Available | Positive | 1804410 - 1805861 | 50535.2 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | EXZ48_08445 | Not Available | Positive | 1805858 - 1807291 | 50198.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EXZ48_08450 | Not Available | Positive | 1807408 - 1808508 | 38731.3 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | EXZ48_08455 | Not Available | Positive | 1808516 - 1809913 | 48348.7 |
| putative lipid ii flippase ftsw | EXZ48_08460 | Not Available | Positive | 1809981 - 1811135 | 42055.5 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | EXZ48_08465 | Not Available | Positive | 1811145 - 1812281 | 39507.0 |
| udp-n-acetylmuramate--l-alanine ligase | EXZ48_08470 | Not Available | Positive | 1812278 - 1813693 | 50473.7 |
| udp-n-acetylmuramate dehydrogenase | EXZ48_08475 | Not Available | Positive | 1813690 - 1814664 | 34995.1 |
| aquaporin z | EXZ48_08480 | Not Available | Positive | 1814801 - 1815538 | 24771.4 |
| aquaporin z | EXZ48_08485 | Not Available | Positive | 1815665 - 1816351 | 22960.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
