Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | EXZ48_08385 | Not Available | Negative | 1794043 - 1794672 | 22017.4 |
| pyrophosphate--fructose-6-phosphate 1-phosphotransferase | EXZ48_08390 | Not Available | Negative | 1794756 - 1795970 | 43430.0 |
| dnaj family molecular chaperone | EXZ48_08395 | Not Available | Positive | 1796210 - 1796950 | 27176.4 |
| n-acetylmuramoyl-l-alanine amidase | EXZ48_08400 | Not Available | Positive | 1796947 - 1797711 | 27522.5 |
| lytic transglycosylase domain-containing protein | EXZ48_08405 | Not Available | Positive | 1798135 - 1798599 | 16497.0 |
| fad-dependent oxidoreductase | EXZ48_08410 | Not Available | Positive | 1798673 - 1799854 | 42173.1 |
| transcriptional regulator mraz | EXZ48_08420 | Not Available | Positive | 1800712 - 1801152 | 16316.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EXZ48_08425 | Not Available | Positive | 1801167 - 1802192 | 35777.8 |
| hypothetical protein | EXZ48_08430 | Not Available | Positive | 1802196 - 1802597 | 15019.1 |
| penicillin-binding protein 2 | EXZ48_08435 | Not Available | Positive | 1802597 - 1804345 | 62638.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
