Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_08335 | Not Available | Positive | 1784098 - 1784295 | 7296.22 |
| dmt family transporter | EXZ48_08340 | Not Available | Negative | 1784449 - 1785351 | 31537.8 |
| lytic murein transglycosylase | EXZ48_08345 | Not Available | Negative | 1785529 - 1786725 | 42929.2 |
| glycoside hydrolase | EXZ48_08350 | Not Available | Negative | 1786897 - 1787676 | 29235.2 |
| porin family protein | EXZ48_08355 | Not Available | Negative | 1787867 - 1788535 | 23695.2 |
| eal domain-containing protein | EXZ48_08360 | Not Available | Positive | 1788768 - 1790330 | 57349.0 |
| class c beta-lactamase-related serine hydrolase | EXZ48_08365 | Not Available | Positive | 1790395 - 1791801 | 49953.4 |
| isopropylmalate/homocitrate/citramalate synthase | EXZ48_08370 | Not Available | Negative | 1791786 - 1792187 | 15059.6 |
| n-acetyltransferase | EXZ48_08375 | Not Available | Positive | 1792371 - 1792958 | 22287.6 |
| lytic transglycosylase domain-containing protein | EXZ48_08380 | Not Available | Negative | 1792981 - 1793910 | 31840.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
