Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4432 family protein | EXZ48_08285 | Not Available | Positive | 1772667 - 1773521 | 30294.7 |
| tigr01244 family phosphatase | EXZ48_08290 | Not Available | Positive | 1773680 - 1774018 | 12011.3 |
| thiamine pyrophosphate-binding protein | EXZ48_08295 | Not Available | Negative | 1774204 - 1775853 | 59939.6 |
| coa transferase | EXZ48_08300 | Not Available | Negative | 1775850 - 1777046 | 42159.4 |
| dmt family transporter | EXZ48_08305 | Not Available | Negative | 1777217 - 1778164 | 33840.9 |
| alpha/beta hydrolase | EXZ48_08310 | Not Available | Negative | 1778161 - 1779102 | 33908.4 |
| ribonuclease | EXZ48_08315 | Not Available | Positive | 1779295 - 1780041 | 26081.6 |
| energy-dependent translational throttle protein etta | EXZ48_08320 | Not Available | Positive | 1780245 - 1781894 | 60719.3 |
| metalloregulator arsr/smtb family transcription factor | EXZ48_08325 | Not Available | Positive | 1782044 - 1783051 | 36974.4 |
| methylenetetrahydrofolate reductase | EXZ48_08330 | Not Available | Positive | 1783053 - 1783955 | 32014.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
