Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease subunit | EXZ48_08235 | Not Available | Positive | 1759559 - 1760068 | 19199.8 |
| trap transporter large permease subunit | EXZ48_08240 | Not Available | Positive | 1760065 - 1761387 | 47790.0 |
| c4-dicarboxylate abc transporter | EXZ48_08245 | Not Available | Positive | 1761517 - 1762572 | 38225.2 |
| glutamine synthetase | EXZ48_08250 | Not Available | Positive | 1762652 - 1764016 | 51128.5 |
| aldehyde dehydrogenase family protein | EXZ48_08255 | Not Available | Positive | 1764132 - 1765511 | 50014.6 |
| iron-containing alcohol dehydrogenase | EXZ48_08260 | Not Available | Positive | 1765511 - 1766656 | 40274.6 |
| para family protein | EXZ48_08265 | Not Available | Positive | 1766876 - 1767592 | 25856.4 |
| globin-coupled sensor protein | EXZ48_08270 | Not Available | Positive | 1767849 - 1769372 | 54074.9 |
| glycosyl hydrolase | EXZ48_08275 | Not Available | Negative | 1769532 - 1770725 | 43364.6 |
| murein l,d-transpeptidase | EXZ48_08280 | Not Available | Negative | 1770927 - 1772333 | 50061.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
