Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent hydrolase | EXZ48_08135 | Not Available | Positive | 1738853 - 1740121 | 44313.7 |
| duf917 domain-containing protein | EXZ48_08140 | Not Available | Positive | 1740121 - 1741212 | 37435.1 |
| urocanate hydratase | EXZ48_08145 | Not Available | Positive | 1741387 - 1743048 | 59513.6 |
| hypothetical protein | EXZ48_08150 | Not Available | Positive | 1743064 - 1743630 | 20522.8 |
| glycosyl hydrolase | EXZ48_08155 | Not Available | Positive | 1743773 - 1744807 | 38315.0 |
| hypothetical protein | EXZ48_08160 | Not Available | Negative | 1744939 - 1745538 | 22829.4 |
| l,d-transpeptidase | EXZ48_08165 | Not Available | Positive | 1745705 - 1746427 | 26165.5 |
| sdr family oxidoreductase | EXZ48_08170 | Not Available | Negative | 1746456 - 1747217 | 26988.7 |
| abc transporter permease | EXZ48_08175 | Not Available | Negative | 1747223 - 1748047 | 28897.3 |
| abc transporter permease | EXZ48_08180 | Not Available | Negative | 1748047 - 1748952 | 32920.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
