Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_08035 | Not Available | Negative | 1714876 - 1715826 | 34852.5 |
| abc transporter atp-binding protein | EXZ48_08040 | Not Available | Negative | 1715823 - 1716821 | 35724.2 |
| extracellular solute-binding protein | EXZ48_08045 | Not Available | Negative | 1717011 - 1718171 | 42722.5 |
| lysr family transcriptional regulator | EXZ48_08050 | Not Available | Negative | 1718298 - 1719206 | 33011.7 |
| alpha/beta hydrolase | EXZ48_08055 | Not Available | Positive | 1719437 - 1720333 | 31831.0 |
| act domain-containing protein | EXZ48_08060 | Not Available | Positive | 1720330 - 1720746 | 14760.7 |
| hypothetical protein | EXZ48_08065 | Not Available | Positive | 1720746 - 1721096 | 11930.3 |
| abc transporter atp-binding protein | EXZ48_08070 | Not Available | Negative | 1721305 - 1722936 | 59176.9 |
| abc transporter permease | EXZ48_08075 | Not Available | Negative | 1722929 - 1723756 | 29353.8 |
| abc transporter permease | EXZ48_08080 | Not Available | Negative | 1723753 - 1724862 | 38955.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
