Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | EXZ48_07735 | Not Available | Negative | 1642566 - 1643666 | 40857.0 |
| hypothetical protein | EXZ48_07740 | Not Available | Negative | 1643839 - 1644048 | 8041.37 |
| hd domain-containing protein | EXZ48_07745 | Not Available | Negative | 1644041 - 1644511 | 17312.3 |
| l-threonine 3-dehydrogenase | EXZ48_07750 | Not Available | Positive | 1645382 - 1646416 | 37327.5 |
| mate family efflux transporter | EXZ48_07755 | Not Available | Positive | 1646530 - 1647852 | 47337.8 |
| fad-binding oxidoreductase | EXZ48_07760 | Not Available | Negative | 1647972 - 1649246 | 45589.0 |
| amino acid abc transporter atp-binding protein | EXZ48_07765 | Not Available | Negative | 1649281 - 1650009 | 26855.9 |
| amino acid abc transporter permease | EXZ48_07770 | Not Available | Negative | 1650058 - 1650720 | 23549.4 |
| amino acid abc transporter permease | EXZ48_07775 | Not Available | Negative | 1650734 - 1651402 | 24015.2 |
| amino acid abc transporter substrate-binding protein | EXZ48_07780 | Not Available | Negative | 1651576 - 1652334 | 26656.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
