Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | EXZ48_07685 | Not Available | Negative | 1628645 - 1629403 | 27304.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EXZ48_07690 | Not Available | Positive | 1629611 - 1630762 | 41234.1 |
| glucose 1-dehydrogenase | EXZ48_07695 | Not Available | Negative | 1630845 - 1631609 | 25952.0 |
| ribonuclease e/g | EXZ48_07700 | Not Available | Negative | 1631742 - 1634591 | 105485.0 |
| n-acetylmuramoyl-l-alanine amidase | EXZ48_07705 | Not Available | Positive | 1635226 - 1636467 | 44482.2 |
| penicillin-binding protein 1a | EXZ48_07710 | Not Available | Positive | 1636729 - 1639176 | 88643.7 |
| peptide chain release factor 2 | EXZ48_07715 | Not Available | Positive | 1639278 - 1640409 | 42242.2 |
| hypothetical protein | EXZ48_07720 | Not Available | Negative | 1640539 - 1641045 | 17877.1 |
| nad kinase | EXZ48_07725 | Not Available | Negative | 1641080 - 1641853 | 28133.4 |
| hypothetical protein | EXZ48_07730 | Not Available | Negative | 1641978 - 1642172 | 6886.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
