Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | EXZ48_07085 | Not Available | Negative | 1505008 - 1505583 | 20675.0 |
| chain-length determining protein | EXZ48_07090 | Not Available | Positive | 1505798 - 1508065 | 81935.3 |
| gnat family n-acetyltransferase | EXZ48_07095 | Not Available | Negative | 1508072 - 1509304 | 45974.0 |
| nudix domain-containing protein | EXZ48_07100 | Not Available | Positive | 1509503 - 1509946 | 16765.9 |
| duf2842 domain-containing protein | EXZ48_07105 | Not Available | Negative | 1509948 - 1510166 | 8142.56 |
| heme a synthase | EXZ48_07110 | Not Available | Positive | 1510370 - 1511461 | 41037.2 |
| streptomycin resistance protein | EXZ48_07115 | Not Available | Negative | 1511467 - 1512309 | 30728.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EXZ48_07120 | Not Available | Negative | 1512306 - 1513238 | 33373.3 |
| agmatinase | EXZ48_07125 | Not Available | Negative | 1513369 - 1514322 | 34329.9 |
| 30s ribosomal protein s9 | EXZ48_07130 | Not Available | Negative | 1514450 - 1514926 | 16818.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
