Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_26830 | Not Available | Positive | 5621471 - 5621962 | 17424.3 |
| Hypothetical protein | EXZ48_26835 | Not Available | Positive | 5622066 - 5624960 | 100794.0 |
| Phage tail protein | EXZ48_26840 | Not Available | Positive | 5624957 - 5625442 | 17376.1 |
| Late control d family protein | EXZ48_26845 | Not Available | Positive | 5625442 - 5626449 | 36074.6 |
| Tail protein | EXZ48_26850 | Not Available | Positive | 5626442 - 5626708 | 9728.56 |
| Hypothetical protein | EXZ48_26855 | Not Available | Positive | 5626734 - 5626952 | 7678.66 |
| Lysozyme | EXZ48_26860 | Not Available | Positive | 5626945 - 5627448 | 18349.2 |
| Hypothetical protein | EXZ48_26865 | Not Available | Positive | 5627451 - 5627891 | 16001.2 |
| Hypothetical protein | EXZ48_27240 | Not Available | Positive | 5701937 - 5702131 | 6803.21 |
| hypothetical protein | EXZ48_27245 | Not Available | Negative | 5702185 - 5702601 | 14768.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
