Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_06485 | Not Available | Negative | 1385372 - 1385641 | 10045.0 |
| tigr02301 family protein | EXZ48_06490 | Not Available | Negative | 1385734 - 1386156 | 15574.6 |
| nudix hydrolase | EXZ48_06495 | Not Available | Negative | 1386153 - 1386587 | 15497.2 |
| sos response-associated peptidase | EXZ48_06500 | Not Available | Positive | 1386648 - 1387427 | 28726.4 |
| hypothetical protein | EXZ48_06505 | Not Available | Negative | 1387459 - 1387641 | 6684.02 |
| cysteine--trna ligase | EXZ48_06510 | Not Available | Positive | 1388247 - 1389680 | 53244.5 |
| gfa family protein | EXZ48_06515 | Not Available | Positive | 1389662 - 1390159 | 17972.1 |
| gfa family protein | EXZ48_06520 | Not Available | Positive | 1390156 - 1390653 | 18370.5 |
| gfa family protein | EXZ48_06525 | Not Available | Positive | 1390780 - 1391262 | 17917.2 |
| prolyl aminopeptidase | EXZ48_06530 | Not Available | Positive | 1391259 - 1392218 | 35948.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
