Halorubrum sp. SS5

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SS5 is a rod-shaped archaeon notable for its single replicon, which is a characteristic that distinguishes it from many bacteria that typically possess multiple replicons. This organism possesses flagella, indicating that it has the capability for motility, which may facilitate its movement in its natural habitat. The accession number for Halorubrum sp. SS5 is SGXW00000000.1, which allows for its genetic and genomic data to be accessed and studied further. Understanding the genetic makeup of this archaeon can provide insights into its metabolic capabilities and ecological roles. In a broader biological context, Halorubrum species, including SS5, are often found in saline environments, highlighting their adaptation to high-salinity conditions. The presence of flagella suggests that Halorubrum sp. SS5 may actively navigate toward optimal environmental conditions, such as areas with suitable nutrient concentrations. This motility could play a significant role in the organism's survival and ecological interactions within its habitat, particularly in the harsh conditions where it thrives. Overall, the characteristics of Halorubrum sp. SS5 underscore its adaptability and potential contributions to microbial diversity in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SS5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SS5 NODE_2455_length_200_cov_667.331034, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine(13) synthase trudEXE43_27695Not AvailablePositive4722854 - 47231048749.09
trmb family transcriptional regulatorEXE43_27700Not AvailablePositive4723105 - 47231842805.27
nucleotide pyrophosphataseEXE43_27705Not AvailablePositive4723356 - 47236069607.94
trna pseudouridine(13) synthase trudEXE43_27710Not AvailablePositive4723858 - 47241088705.03
atp-binding proteinEXE43_27715Not AvailablePositive4724360 - 47246109055.53
peroxiredoxinEXE43_27720Not AvailablePositive4725614 - 47257233790.3
eama/rhat family transporterEXE43_27725Not AvailableNegative4725763 - 47258633362.23
rna-guided pseudouridylation complex pseudouridine synthase subunit cbf5EXE43_27730Not AvailableNegative4726364 - 47265526560.78
abc transporter substrate-binding proteinEXE43_27740Not AvailablePositive4728120 - 47283608049.93
ykgj family cysteine cluster proteinEXE43_27745Not AvailableNegative4728361 - 47286098526.7

Displaying genes 5321 – 5330 of 5639 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.