Halorubrum sp. SS5

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SS5 is a rod-shaped archaeon notable for its single replicon, which is a characteristic that distinguishes it from many bacteria that typically possess multiple replicons. This organism possesses flagella, indicating that it has the capability for motility, which may facilitate its movement in its natural habitat. The accession number for Halorubrum sp. SS5 is SGXW00000000.1, which allows for its genetic and genomic data to be accessed and studied further. Understanding the genetic makeup of this archaeon can provide insights into its metabolic capabilities and ecological roles. In a broader biological context, Halorubrum species, including SS5, are often found in saline environments, highlighting their adaptation to high-salinity conditions. The presence of flagella suggests that Halorubrum sp. SS5 may actively navigate toward optimal environmental conditions, such as areas with suitable nutrient concentrations. This motility could play a significant role in the organism's survival and ecological interactions within its habitat, particularly in the harsh conditions where it thrives. Overall, the characteristics of Halorubrum sp. SS5 underscore its adaptability and potential contributions to microbial diversity in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SS5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SS5 NODE_2455_length_200_cov_667.331034, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide-methionine (s)-s-oxide reductaseEXE43_12640Not AvailableNegative2487355 - 248789420361.3
6,7-dimethyl-8-ribityllumazine synthaseEXE43_12645Not AvailablePositive2488354 - 248875813779.0
pyridoxal phosphate-dependent aminotransferaseEXE43_12650Not AvailablePositive2488784 - 248993841071.4
universal stress proteinEXE43_12655Not AvailablePositive2490069 - 249057217291.9
hypothetical proteinEXE43_12660Not AvailablePositive2490667 - 249109515595.0
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcEXE43_12665Not AvailablePositive2491173 - 249147511005.3
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataEXE43_12670Not AvailablePositive2491476 - 249277444872.6
hypothetical proteinEXE43_12675Not AvailablePositive2492771 - 249327718922.9
shoct domain-containing proteinEXE43_12680Not AvailablePositive2493378 - 249374914324.2
yhby family rna-binding proteinEXE43_12685Not AvailablePositive2493845 - 24940908883.41

Displaying genes 2441 – 2450 of 5639 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.