Halorubrum sp. SS5

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SS5 is a rod-shaped archaeon notable for its single replicon, which is a characteristic that distinguishes it from many bacteria that typically possess multiple replicons. This organism possesses flagella, indicating that it has the capability for motility, which may facilitate its movement in its natural habitat. The accession number for Halorubrum sp. SS5 is SGXW00000000.1, which allows for its genetic and genomic data to be accessed and studied further. Understanding the genetic makeup of this archaeon can provide insights into its metabolic capabilities and ecological roles. In a broader biological context, Halorubrum species, including SS5, are often found in saline environments, highlighting their adaptation to high-salinity conditions. The presence of flagella suggests that Halorubrum sp. SS5 may actively navigate toward optimal environmental conditions, such as areas with suitable nutrient concentrations. This motility could play a significant role in the organism's survival and ecological interactions within its habitat, particularly in the harsh conditions where it thrives. Overall, the characteristics of Halorubrum sp. SS5 underscore its adaptability and potential contributions to microbial diversity in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SS5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SS5 NODE_2455_length_200_cov_667.331034, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinEXE43_00840Not AvailablePositive165794 - 16688237872.1
abc transporterEXE43_00845Not AvailablePositive166879 - 16769428039.7
Trna-valNot AvailableNot AvailablePositive167924 - 168000Not Available
duf192 domain-containing proteinEXE43_00855Not AvailablePositive168062 - 16854116742.8
shoct domain-containing proteinEXE43_00860Not AvailablePositive168606 - 16901915646.6
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcEXE43_00865Not AvailableNegative169068 - 17018640549.4
carbohydrate abc transporter permeaseEXE43_00870Not AvailableNegative170289 - 17123333756.2
sugar abc transporter permeaseEXE43_00875Not AvailableNegative171230 - 17221636183.8
carbohydrate abc transporter substrate-binding proteinEXE43_00880Not AvailableNegative172270 - 17355945836.1
duf4013 domain-containing proteinEXE43_00885Not AvailablePositive173731 - 17438722771.3

Displaying genes 221 – 230 of 5639 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.