Halorubrum sp. SD690R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD690R is a rod-shaped archaeon characterized by the presence of flagella, which facilitates movement in its environment. This organism has been cataloged with the accession number SGTV00000000.1, indicating its genomic sequence is available for further study. It possesses a single replicon, which is typical for many archaeal species, suggesting a streamlined genomic organization. The presence of flagella in Halorubrum sp. SD690R may confer advantages in adapting to its ecological niche, allowing it to navigate through briny environments where it is typically found. The mobility provided by the flagella can be crucial for accessing nutrients and evading potential threats, thereby enhancing its survival in extreme conditions. Ecologically, Halorubrum sp. SD690R can contribute to the microbial diversity of hypersaline ecosystems and plays a role in the biogeochemical cycling of elements in such environments. Understanding the traits of this organism can provide insights into the adaptability and survivability of life in extreme conditions, highlighting the resilience of microbial life in harsh habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD690R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD690R NODE_180_length_214_cov_333.850575, whole

Gene Summary

Adenine Count

634266 bp

Thymine Count

626435 bp

Guanine Count

1244717 bp

Cytosine Count

1230196 bp

Genome Length

3750009 bp

Protein-coding Genes

3542 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific integraseEXE41_17785Not AvailablePositive3548503 - 354917125334.3
hypothetical proteinEXE41_17790Not AvailableNegative3549486 - 355030731599.0
hypothetical proteinEXE41_17795Not AvailableNegative3550726 - 355108213584.5
marr family transcriptional regulatorEXE41_17800Not AvailablePositive3551370 - 35516309717.69
hypothetical proteinEXE41_17805Not AvailableNegative3552159 - 355265016815.9
glucose 1-dehydrogenaseEXE41_17810Not AvailablePositive3552903 - 355365826307.6
type ii toxin-antitoxin system hica family toxinEXE41_17815Not AvailableNegative3553891 - 35541459486.07
type ii toxin-antitoxin system hicb family antitoxinEXE41_17820Not AvailableNegative3554150 - 355443410012.1
rida family proteinEXE41_17825Not AvailableNegative3555038 - 355541213872.4
2fe-2s iron-sulfur cluster binding domain-containing proteinEXE41_17830Not AvailableNegative3555414 - 355579713982.9

Displaying genes 3401 – 3410 of 3603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.