Halorubrum sp. SD690R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD690R is a rod-shaped archaeon characterized by the presence of flagella, which facilitates movement in its environment. This organism has been cataloged with the accession number SGTV00000000.1, indicating its genomic sequence is available for further study. It possesses a single replicon, which is typical for many archaeal species, suggesting a streamlined genomic organization. The presence of flagella in Halorubrum sp. SD690R may confer advantages in adapting to its ecological niche, allowing it to navigate through briny environments where it is typically found. The mobility provided by the flagella can be crucial for accessing nutrients and evading potential threats, thereby enhancing its survival in extreme conditions. Ecologically, Halorubrum sp. SD690R can contribute to the microbial diversity of hypersaline ecosystems and plays a role in the biogeochemical cycling of elements in such environments. Understanding the traits of this organism can provide insights into the adaptability and survivability of life in extreme conditions, highlighting the resilience of microbial life in harsh habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD690R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD690R NODE_180_length_214_cov_333.850575, whole

Gene Summary

Adenine Count

634266 bp

Thymine Count

626435 bp

Guanine Count

1244717 bp

Cytosine Count

1230196 bp

Genome Length

3750009 bp

Protein-coding Genes

3542 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpeEXE41_12505Not AvailablePositive2531847 - 253252424312.2
5'/3'-nucleotidase sureEXE41_12510Not AvailableNegative2532538 - 253333227845.0
hypothetical proteinEXE41_12515Not AvailablePositive2533460 - 253375910931.3
acyltransferaseEXE41_12520Not AvailableNegative2533783 - 253433119716.3
phosphoribosylamine--glycine ligaseEXE41_12525Not AvailableNegative2534407 - 253569045249.2
thioredoxin domain-containing proteinEXE41_12530Not AvailablePositive2535832 - 253807881314.0
geranylgeranyl reductase family proteinEXE41_12535Not AvailablePositive2538137 - 253926140114.7
tram domain-containing proteinEXE41_12540Not AvailableNegative2539301 - 253978016331.5
mandelate racemase/muconate lactonizing enzyme family proteinEXE41_12545Not AvailablePositive2539877 - 254111545803.5
histidinol-phosphataseEXE41_12550Not AvailableNegative2541341 - 254212629173.4

Displaying genes 2421 – 2430 of 3603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.