Halorubrum sp. SD690R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD690R is a rod-shaped archaeon characterized by the presence of flagella, which facilitates movement in its environment. This organism has been cataloged with the accession number SGTV00000000.1, indicating its genomic sequence is available for further study. It possesses a single replicon, which is typical for many archaeal species, suggesting a streamlined genomic organization. The presence of flagella in Halorubrum sp. SD690R may confer advantages in adapting to its ecological niche, allowing it to navigate through briny environments where it is typically found. The mobility provided by the flagella can be crucial for accessing nutrients and evading potential threats, thereby enhancing its survival in extreme conditions. Ecologically, Halorubrum sp. SD690R can contribute to the microbial diversity of hypersaline ecosystems and plays a role in the biogeochemical cycling of elements in such environments. Understanding the traits of this organism can provide insights into the adaptability and survivability of life in extreme conditions, highlighting the resilience of microbial life in harsh habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD690R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD690R NODE_180_length_214_cov_333.850575, whole

Gene Summary

Adenine Count

634266 bp

Thymine Count

626435 bp

Guanine Count

1244717 bp

Cytosine Count

1230196 bp

Genome Length

3750009 bp

Protein-coding Genes

3542 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseEXE41_09945Not AvailableNegative2016244 - 201713131182.4
abc transporter permeaseEXE41_09950Not AvailableNegative2017128 - 201807533954.8
peptide abc transporter substrate-binding proteinEXE41_09955Not AvailableNegative2018079 - 201960255627.2
atp-binding proteinEXE41_09960Not AvailableNegative2019773 - 202048025931.3
gtp-binding proteinEXE41_09965Not AvailableNegative2020800 - 202206846744.8
thioredoxin reductase-like proteinEXE41_09970Not AvailablePositive2022133 - 202328141702.2
30s ribosomal protein s14EXE41_09975Not AvailablePositive2023284 - 20234697154.3
ferrous iron transporter bEXE41_09980Not AvailablePositive2023462 - 202517460649.8
hypothetical proteinEXE41_09985Not AvailablePositive2025178 - 202558815167.7
arsr family transcriptional regulatorEXE41_09990Not AvailablePositive2026001 - 202636012898.9

Displaying genes 1931 – 1940 of 3603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.