Halorubrum sp. SD690R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD690R is a rod-shaped archaeon characterized by the presence of flagella, which facilitates movement in its environment. This organism has been cataloged with the accession number SGTV00000000.1, indicating its genomic sequence is available for further study. It possesses a single replicon, which is typical for many archaeal species, suggesting a streamlined genomic organization. The presence of flagella in Halorubrum sp. SD690R may confer advantages in adapting to its ecological niche, allowing it to navigate through briny environments where it is typically found. The mobility provided by the flagella can be crucial for accessing nutrients and evading potential threats, thereby enhancing its survival in extreme conditions. Ecologically, Halorubrum sp. SD690R can contribute to the microbial diversity of hypersaline ecosystems and plays a role in the biogeochemical cycling of elements in such environments. Understanding the traits of this organism can provide insights into the adaptability and survivability of life in extreme conditions, highlighting the resilience of microbial life in harsh habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD690R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD690R NODE_180_length_214_cov_333.850575, whole

Gene Summary

Adenine Count

634266 bp

Thymine Count

626435 bp

Guanine Count

1244717 bp

Cytosine Count

1230196 bp

Genome Length

3750009 bp

Protein-coding Genes

3542 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseEXE41_09790Not AvailablePositive1989592 - 199090550059.2
arsr family transcriptional regulatorEXE41_09795Not AvailableNegative1990965 - 199146819264.8
hypothetical proteinEXE41_09800Not AvailablePositive1991583 - 199194212507.6
nosl family proteinEXE41_09805Not AvailablePositive1992131 - 199276022183.6
hypothetical proteinEXE41_09810Not AvailablePositive1992880 - 199336517222.4
copg family ribbon-helix-helix proteinEXE41_09815Not AvailablePositive1993517 - 199394516074.0
nitrate abc transporter substrate-binding proteinEXE41_09820Not AvailablePositive1994077 - 199509936297.1
abc transporter permeaseEXE41_09825Not AvailablePositive1995099 - 199594130121.1
abc transporter atp-binding proteinEXE41_09830Not AvailablePositive1995932 - 199672028638.6
nickel-responsive transcriptional regulator nikrEXE41_09835Not AvailablePositive1996819 - 199722915491.7

Displaying genes 1901 – 1910 of 3603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.