Halorubrum sp. SD690R

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD690R is a rod-shaped archaeon characterized by the presence of flagella, which facilitates movement in its environment. This organism has been cataloged with the accession number SGTV00000000.1, indicating its genomic sequence is available for further study. It possesses a single replicon, which is typical for many archaeal species, suggesting a streamlined genomic organization. The presence of flagella in Halorubrum sp. SD690R may confer advantages in adapting to its ecological niche, allowing it to navigate through briny environments where it is typically found. The mobility provided by the flagella can be crucial for accessing nutrients and evading potential threats, thereby enhancing its survival in extreme conditions. Ecologically, Halorubrum sp. SD690R can contribute to the microbial diversity of hypersaline ecosystems and plays a role in the biogeochemical cycling of elements in such environments. Understanding the traits of this organism can provide insights into the adaptability and survivability of life in extreme conditions, highlighting the resilience of microbial life in harsh habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD690R
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD690R NODE_180_length_214_cov_333.850575, whole

Gene Summary

Adenine Count

634266 bp

Thymine Count

626435 bp

Guanine Count

1244717 bp

Cytosine Count

1230196 bp

Genome Length

3750009 bp

Protein-coding Genes

3542 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation elongation factor ef-1 subunit alphaEXE41_08965Not AvailablePositive1817954 - 181921945660.1
30s ribosomal protein s10EXE41_08970Not AvailablePositive1819223 - 181953111430.5
rhomboid family intramembrane serine proteaseEXE41_08975Not AvailableNegative1819630 - 182019018619.4
hypothetical proteinEXE41_08980Not AvailableNegative1820263 - 182056511118.5
flippase-like domain-containing proteinEXE41_08985Not AvailablePositive1820685 - 182181837868.0
alpha-1 4-glucan-protein synthaseEXE41_08990Not AvailablePositive1821849 - 182303043903.1
extracellular solute-binding proteinEXE41_08995Not AvailablePositive1823070 - 182421840436.3
glycosyltransferase family 39 proteinEXE41_09000Not AvailablePositive1824283 - 182658680688.8
is6 family transposaseEXE41_09005Not AvailablePositive1826806 - 18268873363.02
is1595 family transposaseEXE41_09010Not AvailablePositive1826888 - 18269913633.39

Displaying genes 1741 – 1750 of 3603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.