Halorubrum sp. ASP1

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. ASP1 is a rod-shaped archaeon notable for its unique adaptations to extreme environments. This microorganism possesses flagella, which facilitate motility, allowing it to navigate its habitat effectively. Halorubrum sp. ASP1 has a single replicon, indicating a streamlined genomic organization, which may contribute to its efficiency in responding to environmental stresses. The accession number for Halorubrum sp. ASP1 is SGUA00000000.1, which provides a reference point for genomic and phenotypic studies. The presence of flagella is particularly significant, as it suggests that this organism may have evolved mechanisms for survival and proliferation in challenging environments, such as high salinity or extreme temperatures. In an ecological context, Halorubrum sp. ASP1 likely plays a role in biogeochemical cycles within its habitat, contributing to the microbial community's dynamics. Its motility could enhance its ability to colonize diverse niches, interact with other microorganisms, and participate in nutrient cycling. Understanding the traits of Halorubrum sp. ASP1 not only sheds light on its physiological capabilities but also underscores the complexity of microbial life in extreme ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. ASP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. ASP1 NODE_114_length_209_cov_1951.560976, whole

Gene Summary

Adenine Count

586079 bp

Thymine Count

596367 bp

Guanine Count

1218580 bp

Cytosine Count

1222449 bp

Genome Length

3631817 bp

Protein-coding Genes

3477 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-dependent thiol peroxidaseEXE48_15075Not AvailableNegative3023817 - 302428416782.9
pas domain s-box proteinEXE48_15080Not AvailablePositive3024359 - 302641073964.2
cgcgg family rsam-modified ripp proteinEXE48_15085Not AvailableNegative3026438 - 302676111384.8
duf2249 domain-containing proteinEXE48_15090Not AvailablePositive3026892 - 30271288644.75
type ii methionyl aminopeptidaseEXE48_15095Not AvailablePositive3027213 - 302812132446.4
hit domain-containing proteinEXE48_15100Not AvailablePositive3028121 - 302867220016.1
phosphate abc transporter atp-binding proteinEXE48_15105Not AvailableNegative3028920 - 302967227024.5
abc transporter permease subunitEXE48_15110Not AvailableNegative3029695 - 303044125161.0
molybdenum transporterEXE48_15115Not AvailableNegative3030444 - 303141833947.7
abc transporterEXE48_15120Not AvailablePositive3031513 - 303232226616.7

Displaying genes 2921 – 2930 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.