Halorubrum sp. ASP1

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. ASP1 is a rod-shaped archaeon notable for its unique adaptations to extreme environments. This microorganism possesses flagella, which facilitate motility, allowing it to navigate its habitat effectively. Halorubrum sp. ASP1 has a single replicon, indicating a streamlined genomic organization, which may contribute to its efficiency in responding to environmental stresses. The accession number for Halorubrum sp. ASP1 is SGUA00000000.1, which provides a reference point for genomic and phenotypic studies. The presence of flagella is particularly significant, as it suggests that this organism may have evolved mechanisms for survival and proliferation in challenging environments, such as high salinity or extreme temperatures. In an ecological context, Halorubrum sp. ASP1 likely plays a role in biogeochemical cycles within its habitat, contributing to the microbial community's dynamics. Its motility could enhance its ability to colonize diverse niches, interact with other microorganisms, and participate in nutrient cycling. Understanding the traits of Halorubrum sp. ASP1 not only sheds light on its physiological capabilities but also underscores the complexity of microbial life in extreme ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. ASP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. ASP1 NODE_114_length_209_cov_1951.560976, whole

Gene Summary

Adenine Count

586079 bp

Thymine Count

596367 bp

Guanine Count

1218580 bp

Cytosine Count

1222449 bp

Genome Length

3631817 bp

Protein-coding Genes

3477 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-alpha-glucanotransferaseEXE48_11320Not AvailablePositive2223372 - 222486255932.1
sodium:calcium antiporterEXE48_11325Not AvailablePositive2224866 - 222589435403.3
hypothetical proteinEXE48_11330Not AvailableNegative2225943 - 22261557650.7
hypothetical proteinEXE48_11335Not AvailablePositive2226244 - 222657611251.7
zn-dependent hydrolaseEXE48_11340Not AvailablePositive2226664 - 222797745125.5
transcription initiation factor iibEXE48_11345Not AvailablePositive2228292 - 222934738744.9
hypothetical proteinEXE48_11350Not AvailablePositive2229472 - 22296516922.2
metal-binding proteinEXE48_11355Not AvailablePositive2229888 - 22301218693.22
duf555 domain-containing proteinEXE48_11360Not AvailableNegative2230240 - 223068015886.3
dna-3-methyladenine glycosylase 2 family proteinEXE48_11365Not AvailableNegative2230821 - 223174734451.3

Displaying genes 2211 – 2220 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.